SubtiBank SubtiBank
yvcD [2018-10-15 12:45:30]
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yvcD [2018-10-15 12:45:30]

unknown
locus
BSU34810
pI
4.68
mw
55.21 kDa
protein length
484 aa Sequence Blast
gene length
1452 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    3,576,165 → 3,577,619

    Expression and Regulation

    Operons

    genes
    [gene|ED1F82463BAA28B67184BFAB5CB23CF26A62999D|bmrA]-[gene|EFF0635A4BBB62558A04BA49195D76234776F943|yvcD]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|21077936], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulation

  • constitutively expressed [Pubmed|21077936]

    • additional information

  • half-life of the mRNA: 1.5 min [PubMed|21077936]
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    Biological materials

    Mutant

  • MGNA-B644 (yvcD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1643 NBRP B. subtilis, Japan]
  • BKE34810 (Δ[gene|EFF0635A4BBB62558A04BA49195D76234776F943|yvcD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAACTACCCTCCGTTTTA, downstream forward: _UP4_TAGTAAATTTTAAAGAGTTG
  • BKK34810 (Δ[gene|EFF0635A4BBB62558A04BA49195D76234776F943|yvcD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAACTACCCTCCGTTTTA, downstream forward: _UP4_TAGTAAATTTTAAAGAGTTG

    • References

  • 16479537